Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC18.81■□□□□ 0.6
MYCNP04198 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MYCNP04198 MTND2P22-201ENST00000444325 1033 ntBASIC18.81■□□□□ 0.6
MYCNP04198 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.81■□□□□ 0.6
MYCNP04198 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC18.81■□□□□ 0.6
MYCNP04198 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 AL117351.2-201ENST00000513571 157 ntBASIC18.81■□□□□ 0.6
MYCNP04198 AC138701.1-201ENST00000524329 714 ntBASIC18.81■□□□□ 0.6
MYCNP04198 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.81■□□□□ 0.6
MYCNP04198 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 AL121594.4-201ENST00000556211 1196 ntBASIC18.81■□□□□ 0.6
MYCNP04198 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 AC096586.1-201ENST00000610267 561 ntBASIC18.81■□□□□ 0.6
MYCNP04198 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 AC126474.1-201ENST00000623555 1293 ntBASIC18.81■□□□□ 0.6
MYCNP04198 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
MYCNP04198 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
MYCNP04198 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MYCNP04198 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MYCNP04198 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.81■□□□□ 0.6
MYCNP04198 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MYCNP04198 AC022144.1-201ENST00000602255 1580 ntBASIC18.81■□□□□ 0.6
MYCNP04198 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MYCNP04198 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 MIR346-201ENST00000362234 95 ntBASIC18.8■□□□□ 0.6
MYCNP04198 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC18.8■□□□□ 0.6
MYCNP04198 MTND1P22-201ENST00000510572 951 ntBASIC18.8■□□□□ 0.6
MYCNP04198 AC139103.1-201ENST00000534696 1030 ntBASIC18.8■□□□□ 0.6
MYCNP04198 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 CR383656.12-201ENST00000549567 513 ntBASIC18.8■□□□□ 0.6
MYCNP04198 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.8■□□□□ 0.6
MYCNP04198 SPDYE22P-201ENST00000582158 798 ntBASIC18.8■□□□□ 0.6
MYCNP04198 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 AC018529.1-201ENST00000613063 361 ntBASIC18.8■□□□□ 0.6
MYCNP04198 AC005393.1-201ENST00000617916 584 ntBASIC18.8■□□□□ 0.6
MYCNP04198 SPDYE12P-201ENST00000618416 771 ntBASIC18.8■□□□□ 0.6
MYCNP04198 AP001350.2-201ENST00000625104 1094 ntBASIC18.8■□□□□ 0.6
MYCNP04198 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 AL355312.1-201ENST00000407115 2176 ntBASIC18.8■□□□□ 0.6
MYCNP04198 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MYCNP04198 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
MYCNP04198 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MYCNP04198 CROCCP2-202ENST00000412962 2773 ntBASIC18.8■□□□□ 0.6
MYCNP04198 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.8■□□□□ 0.6
MYCNP04198 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
MYCNP04198 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MYCNP04198 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms