Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.98■□□□□ 0.15
PDGFBP01127 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDGFBP01127 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.98■□□□□ 0.15
PDGFBP01127 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.98■□□□□ 0.15
PDGFBP01127 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFBP01127 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDGFBP01127 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.98■□□□□ 0.15
PDGFBP01127 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFBP01127 AL133466.1-201ENST00000447582 150 ntBASIC15.98■□□□□ 0.15
PDGFBP01127 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFBP01127 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDGFBP01127 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDGFBP01127 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFBP01127 MIR3907-201ENST00000579424 151 ntBASIC15.98■□□□□ 0.15
PDGFBP01127 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDGFBP01127 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.98■□□□□ 0.15
PDGFBP01127 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.98■□□□□ 0.15
PDGFBP01127 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.98■□□□□ 0.15
PDGFBP01127 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDGFBP01127 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 AC009053.2-201ENST00000563701 2365 ntBASIC15.98■□□□□ 0.15
PDGFBP01127 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDGFBP01127 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.97■□□□□ 0.15
PDGFBP01127 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.97■□□□□ 0.15
PDGFBP01127 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDGFBP01127 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
PDGFBP01127 AC069218.1-201ENST00000435269 762 ntBASIC15.97■□□□□ 0.15
PDGFBP01127 NKAIN1P1-201ENST00000435754 582 ntBASIC15.97■□□□□ 0.15
PDGFBP01127 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.97■□□□□ 0.15
PDGFBP01127 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.97■□□□□ 0.15
PDGFBP01127 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.97■□□□□ 0.15
PDGFBP01127 AC026410.3-201ENST00000514280 936 ntBASIC15.97■□□□□ 0.15
PDGFBP01127 AC126915.1-201ENST00000522847 1038 ntBASIC15.97■□□□□ 0.15
PDGFBP01127 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.97■□□□□ 0.15
PDGFBP01127 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.97■□□□□ 0.15
PDGFBP01127 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PDGFBP01127 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PDGFBP01127 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.97■□□□□ 0.15
PDGFBP01127 MIR4750-201ENST00000584564 56 ntBASIC15.97■□□□□ 0.15
PDGFBP01127 AC079336.7-201ENST00000623428 1078 ntBASIC15.97■□□□□ 0.15
PDGFBP01127 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PDGFBP01127 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.97■□□□□ 0.15
PDGFBP01127 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PDGFBP01127 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PDGFBP01127 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.97■□□□□ 0.15
PDGFBP01127 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDGFBP01127 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFBP01127 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PDGFBP01127 BNIP3P1-202ENST00000550043 1585 ntBASIC15.96■□□□□ 0.15
PDGFBP01127 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PDGFBP01127 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFBP01127 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.96■□□□□ 0.15
PDGFBP01127 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.96■□□□□ 0.15
PDGFBP01127 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PDGFBP01127 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.96■□□□□ 0.15
PDGFBP01127 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PDGFBP01127 LETM1P2-201ENST00000597330 2178 ntBASIC15.96■□□□□ 0.15
PDGFBP01127 DRD5P1-201ENST00000456605 1438 ntBASIC15.96■□□□□ 0.15
PDGFBP01127 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFBP01127 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
PDGFBP01127 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDGFBP01127 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms