Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PPP1R3DO95685 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PPP1R3DO95685 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PPP1R3DO95685 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.61□□□□□ -0.07
PPP1R3DO95685 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PPP1R3DO95685 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PPP1R3DO95685 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.61□□□□□ -0.07
PPP1R3DO95685 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PPP1R3DO95685 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PPP1R3DO95685 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 AL365330.1-201ENST00000607459 531 ntBASIC14.6□□□□□ -0.07
PPP1R3DO95685 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 CICP13-201ENST00000422015 2789 ntBASIC14.6□□□□□ -0.07
PPP1R3DO95685 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PPP1R3DO95685 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP1R3DO95685 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 AC140658.5-201ENST00000438532 169 ntBASIC14.59□□□□□ -0.07
PPP1R3DO95685 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 AC018845.2-201ENST00000568326 409 ntBASIC14.59□□□□□ -0.07
PPP1R3DO95685 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 AL121894.2-201ENST00000602977 491 ntBASIC14.59□□□□□ -0.07
PPP1R3DO95685 Z83851.2-201ENST00000609564 659 ntBASIC14.59□□□□□ -0.07
PPP1R3DO95685 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 BCAR1-209ENST00000546196 1340 ntBASIC14.59□□□□□ -0.07
PPP1R3DO95685 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP1R3DO95685 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP1R3DO95685 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms