Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH4O75427 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.74■□□□□ 0.27
LRCH4O75427 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.74■□□□□ 0.27
LRCH4O75427 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.74■□□□□ 0.27
LRCH4O75427 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH4O75427 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 AL139010.1-201ENST00000454878 894 ntBASIC16.74■□□□□ 0.27
LRCH4O75427 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 AC092865.5-201ENST00000545435 363 ntBASIC16.74■□□□□ 0.27
LRCH4O75427 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.74■□□□□ 0.27
LRCH4O75427 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH4O75427 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH4O75427 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH4O75427 AC139530.3-201ENST00000620344 690 ntBASIC16.74■□□□□ 0.27
LRCH4O75427 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.74■□□□□ 0.27
LRCH4O75427 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRCH4O75427 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRCH4O75427 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRCH4O75427 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 AC092384.3-202ENST00000564646 2873 ntBASIC16.73■□□□□ 0.27
LRCH4O75427 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH4O75427 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
LRCH4O75427 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRCH4O75427 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.73■□□□□ 0.27
LRCH4O75427 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
LRCH4O75427 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.73■□□□□ 0.27
LRCH4O75427 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.73■□□□□ 0.27
LRCH4O75427 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
LRCH4O75427 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LRCH4O75427 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.73■□□□□ 0.27
LRCH4O75427 AC004835.2-201ENST00000603762 682 ntBASIC16.73■□□□□ 0.27
LRCH4O75427 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.73■□□□□ 0.27
LRCH4O75427 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRCH4O75427 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRCH4O75427 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRCH4O75427 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRCH4O75427 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LRCH4O75427 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRCH4O75427 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.72■□□□□ 0.27
LRCH4O75427 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LRCH4O75427 AC211486.1-202ENST00000416371 468 ntBASIC16.72■□□□□ 0.27
LRCH4O75427 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.72■□□□□ 0.27
LRCH4O75427 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.72■□□□□ 0.27
LRCH4O75427 AC211476.1-201ENST00000503899 468 ntBASIC16.72■□□□□ 0.27
LRCH4O75427 BANF1P1-201ENST00000553684 263 ntBASIC16.72■□□□□ 0.27
LRCH4O75427 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 AC009093.7-201ENST00000623853 1223 ntBASIC16.72■□□□□ 0.27
LRCH4O75427 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRCH4O75427 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRCH4O75427 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRCH4O75427 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRCH4O75427 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms