Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PRKNO60260 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15□□□□□ -0.01
PRKNO60260 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 AL391005.1-201ENST00000623953 2435 ntBASIC15□□□□□ -0.01
PRKNO60260 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15□□□□□ -0.01
PRKNO60260 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 AL035456.1-201ENST00000456064 1369 ntBASIC14.99□□□□□ -0.01
PRKNO60260 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 RPL37AP1-201ENST00000412502 279 ntBASIC14.99□□□□□ -0.01
PRKNO60260 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.99□□□□□ -0.01
PRKNO60260 BCRP1-201ENST00000444246 691 ntBASIC14.99□□□□□ -0.01
PRKNO60260 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.99□□□□□ -0.01
PRKNO60260 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.99□□□□□ -0.01
PRKNO60260 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.99□□□□□ -0.01
PRKNO60260 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 AL589739.1-201ENST00000607720 493 ntBASIC14.99□□□□□ -0.01
PRKNO60260 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.99□□□□□ -0.01
PRKNO60260 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PRKNO60260 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PRKNO60260 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PRKNO60260 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PRKNO60260 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.98□□□□□ -0.01
PRKNO60260 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 AC024909.3-201ENST00000611513 2257 ntBASIC14.98□□□□□ -0.01
PRKNO60260 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.98□□□□□ -0.01
PRKNO60260 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.98□□□□□ -0.01
PRKNO60260 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.98□□□□□ -0.01
PRKNO60260 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.98□□□□□ -0.01
PRKNO60260 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
PRKNO60260 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.98□□□□□ -0.01
PRKNO60260 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms