Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RTL8CO15255 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC10.69□□□□□ -0.7
RTL8CO15255 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 KRT8P22-201ENST00000562317 1415 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
RTL8CO15255 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RTL8CO15255 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
RTL8CO15255 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.69□□□□□ -0.7
RTL8CO15255 FO393414.2-201ENST00000405153 598 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.69□□□□□ -0.7
RTL8CO15255 AL162726.2-201ENST00000438986 1017 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.69□□□□□ -0.7
RTL8CO15255 CSF2RBP1-201ENST00000447905 391 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.69□□□□□ -0.7
RTL8CO15255 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 RNA5SP412-201ENST00000516234 123 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.69□□□□□ -0.7
RTL8CO15255 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.69□□□□□ -0.7
RTL8CO15255 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.69□□□□□ -0.7
RTL8CO15255 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC10.69□□□□□ -0.7
RTL8CO15255 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
RTL8CO15255 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.69□□□□□ -0.7
RTL8CO15255 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.69□□□□□ -0.7
RTL8CO15255 AC244093.1-201ENST00000610837 814 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 CU634019.7-201ENST00000624153 1185 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 FP236241.2-201ENST00000624906 1185 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC10.69□□□□□ -0.7
RTL8CO15255 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
RTL8CO15255 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RTL8CO15255 GPAA1P2-202ENST00000606848 1787 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.69□□□□□ -0.7
RTL8CO15255 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
RTL8CO15255 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RTL8CO15255 AC011270.2-201ENST00000624293 2550 ntBASIC10.69□□□□□ -0.7
RTL8CO15255 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
RTL8CO15255 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RTL8CO15255 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
RTL8CO15255 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
RTL8CO15255 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC10.68□□□□□ -0.7
RTL8CO15255 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC10.68□□□□□ -0.7
RTL8CO15255 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.68□□□□□ -0.7
RTL8CO15255 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.68□□□□□ -0.7
RTL8CO15255 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RTL8CO15255 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTL8CO15255 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms