Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.44■□□□□ 0.06
PCDH17O14917 AC098859.1-201ENST00000502915 1238 ntBASIC15.44■□□□□ 0.06
PCDH17O14917 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 AC051619.7-201ENST00000568314 623 ntBASIC15.44■□□□□ 0.06
PCDH17O14917 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH17O14917 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDH17O14917 Z92544.3-201ENST00000624747 417 ntBASIC15.44■□□□□ 0.06
PCDH17O14917 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH17O14917 SNX33P1-201ENST00000592116 1762 ntBASIC15.44■□□□□ 0.06
PCDH17O14917 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH17O14917 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 TUBB3P1-201ENST00000405796 1332 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 AC010491.1-201ENST00000563101 2797 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH17O14917 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PCDH17O14917 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PCDH17O14917 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 FAM220BP-201ENST00000377689 816 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.43■□□□□ 0.06
PCDH17O14917 SPDYE14P-201ENST00000442619 822 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 KLF2P3-201ENST00000451977 1087 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDH17O14917 RNA5SP421-201ENST00000516864 134 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 AC140878.1-201ENST00000565277 250 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
PCDH17O14917 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDH17O14917 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 AL603832.2-201ENST00000566195 2125 ntBASIC15.43■□□□□ 0.06
PCDH17O14917 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH17O14917 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH17O14917 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDH17O14917 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.42■□□□□ 0.06
PCDH17O14917 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDH17O14917 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDH17O14917 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PCDH17O14917 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDH17O14917 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
PCDH17O14917 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PCDH17O14917 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDH17O14917 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDH17O14917 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
PCDH17O14917 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDH17O14917 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDH17O14917 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
PCDH17O14917 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDH17O14917 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDH17O14917 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDH17O14917 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms