Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.64■□□□□ 0.09
UBFD1O14562 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.64■□□□□ 0.09
UBFD1O14562 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.64■□□□□ 0.09
UBFD1O14562 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.64■□□□□ 0.09
UBFD1O14562 AC099522.2-201ENST00000607001 744 ntBASIC15.64■□□□□ 0.09
UBFD1O14562 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.64■□□□□ 0.09
UBFD1O14562 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.64■□□□□ 0.09
UBFD1O14562 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
UBFD1O14562 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
UBFD1O14562 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBFD1O14562 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
UBFD1O14562 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.64■□□□□ 0.09
UBFD1O14562 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UBFD1O14562 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.63■□□□□ 0.09
UBFD1O14562 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.63■□□□□ 0.09
UBFD1O14562 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 AC074386.1-202ENST00000463561 864 ntBASIC15.63■□□□□ 0.09
UBFD1O14562 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.63■□□□□ 0.09
UBFD1O14562 PDPK2P-202ENST00000562415 1191 ntBASIC15.63■□□□□ 0.09
UBFD1O14562 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 AC068137.2-201ENST00000605408 478 ntBASIC15.63■□□□□ 0.09
UBFD1O14562 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 AL161645.1-201ENST00000622716 1255 ntBASIC15.63■□□□□ 0.09
UBFD1O14562 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UBFD1O14562 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
UBFD1O14562 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.63■□□□□ 0.09
UBFD1O14562 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBFD1O14562 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.63■□□□□ 0.09
UBFD1O14562 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBFD1O14562 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBFD1O14562 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBFD1O14562 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.62■□□□□ 0.09
UBFD1O14562 AC112693.3-201ENST00000624819 1983 ntBASIC15.62■□□□□ 0.09
UBFD1O14562 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.62■□□□□ 0.09
UBFD1O14562 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
UBFD1O14562 AC068418.2-201ENST00000577309 3703 ntBASIC15.62■□□□□ 0.09
UBFD1O14562 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
UBFD1O14562 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.62■□□□□ 0.09
UBFD1O14562 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBFD1O14562 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBFD1O14562 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
UBFD1O14562 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms