Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 BASP1P1-201ENST00000430708 665 ntBASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 AL139384.1-201ENST00000612143 3047 ntBASIC18.95■□□□□ 0.62
PTPDC1A2A3K4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 INGX-202ENST00000489074 768 ntBASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AC073389.1-201ENST00000595595 795 ntBASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AL390754.1-201ENST00000619088 582 ntBASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 FOXO1B-201ENST00000504678 1527 ntBASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPDC1A2A3K4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms