Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 SRD5A3P1-201ENST00000603021 949 ntBASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTDP1Q9Y5B0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 FO393414.2-201ENST00000405153 598 ntBASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AP006294.1-201ENST00000415407 339 ntBASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 COX5BP8-201ENST00000416911 349 ntBASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 SPDYE18-201ENST00000510091 1050 ntBASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AC055876.2-201ENST00000531834 546 ntBASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AL136982.4-201ENST00000437689 1740 ntBASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTDP1Q9Y5B0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTDP1Q9Y5B0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 AC011495.1-201ENST00000498085 584 ntBASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.58■□□□□ 0.56
CTDP1Q9Y5B0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms