Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 UBALD1-205ENST00000590891 2641 ntBASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 KRT8P12-202ENST00000472924 1397 ntBASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSX2IPQ9Y2D8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 SPDYE17-201ENST00000412399 783 ntBASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 API5-211ENST00000534695 560 ntTSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 AC061975.2-201ENST00000581722 295 ntBASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 AL359881.2-201ENST00000602973 570 ntBASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 GPAA1P2-202ENST00000606848 1787 ntBASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.35■□□□□ 0.37
SSX2IPQ9Y2D8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 AL512652.2-201ENST00000625156 1716 ntBASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SSX2IPQ9Y2D8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2IPQ9Y2D8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2IPQ9Y2D8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
SSX2IPQ9Y2D8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2IPQ9Y2D8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2IPQ9Y2D8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.37
SSX2IPQ9Y2D8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2IPQ9Y2D8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms