Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 UNC93B6-202ENST00000528242 690 ntBASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 MIR7706-201ENST00000613747 67 ntBASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AL139011.1-202ENST00000642063 584 ntBASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC106881.1-201ENST00000605849 3329 ntBASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HHLA3Q9XRX5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 GRK6P1-201ENST00000400595 1711 ntBASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 HCG4-201ENST00000418983 998 ntBASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 HLA-J-202ENST00000469281 1241 ntBASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 RNA5SP415-201ENST00000517246 115 ntBASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 AC087641.1-201ENST00000557561 1021 ntBASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.86□□□□□ -0.51
HHLA3Q9XRX5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HHLA3Q9XRX5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.85□□□□□ -0.51
HHLA3Q9XRX5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HHLA3Q9XRX5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
HHLA3Q9XRX5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
HHLA3Q9XRX5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms