Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 AC022211.2-201ENST00000585075 2527 ntBASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ZC3H4Q9UPT8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 MIR33B-201ENST00000385104 96 ntBASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 VDAC1P7-201ENST00000462417 847 ntBASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 NDUFV2P1-201ENST00000596415 907 ntBASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 GPAA1P2-202ENST00000606848 1787 ntBASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 AHCYP2-201ENST00000430630 1300 ntBASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZC3H4Q9UPT8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 AC074338.1-201ENST00000416825 156 ntBASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 AC104982.3-201ENST00000581995 514 ntBASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 AC015818.8-201ENST00000587907 1519 ntBASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms