Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.31■□□□□ 0.84
SCN11AQ9UI33 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 AL590640.2-201ENST00000457038 527 ntBASIC20.31■□□□□ 0.84
SCN11AQ9UI33 AP001582.1-201ENST00000525856 295 ntBASIC20.31■□□□□ 0.84
SCN11AQ9UI33 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN11AQ9UI33 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 RN7SL560P-201ENST00000577943 264 ntBASIC20.3■□□□□ 0.84
SCN11AQ9UI33 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN11AQ9UI33 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN11AQ9UI33 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 PCDHA12-202ENST00000613593 2588 ntBASIC20.28■□□□□ 0.84
SCN11AQ9UI33 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.28■□□□□ 0.84
SCN11AQ9UI33 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.28■□□□□ 0.84
SCN11AQ9UI33 AD000864.1-201ENST00000624076 2295 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms