Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AC027307.3-201ENST00000594262 1100 ntBASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 AL391825.1-201ENST00000457671 1364 ntBASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KIAA1549Q9HCM3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 TNRC18P3-201ENST00000441896 2691 ntBASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 AC004987.2-201ENST00000395959 1148 ntBASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 SERBP1P3-201ENST00000459980 809 ntBASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KIAA1549Q9HCM3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AC055876.2-201ENST00000531834 546 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AC018695.7-201ENST00000624587 2492 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 Z97205.2-201ENST00000564697 1639 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 KRT18P64-201ENST00000434946 1219 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 IGHV3-71-201ENST00000523324 359 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 MIR6069-201ENST00000620069 79 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.23□□□□□ -0.13
KIAA1549Q9HCM3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms