Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 TPM3P8-201ENST00000330554 643 ntBASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AC004923.1-202ENST00000642106 209 ntBASIC14.66□□□□□ -0.06
CHD8Q9HCK8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AC009053.2-201ENST00000563701 2365 ntBASIC14.66□□□□□ -0.06
CHD8Q9HCK8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 RTN3P1-201ENST00000536295 711 ntBASIC14.66□□□□□ -0.06
CHD8Q9HCK8 RN7SL48P-201ENST00000579283 293 ntBASIC14.66□□□□□ -0.06
CHD8Q9HCK8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CHD8Q9HCK8 AC133963.1-201ENST00000504166 1679 ntBASIC14.65□□□□□ -0.06
CHD8Q9HCK8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 AC116345.2-201ENST00000512837 523 ntBASIC14.65□□□□□ -0.06
CHD8Q9HCK8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 MIR6816-201ENST00000620368 66 ntBASIC14.65□□□□□ -0.06
CHD8Q9HCK8 TUBB8P12-201ENST00000308911 1335 ntBASIC14.65□□□□□ -0.06
CHD8Q9HCK8 TUBB7P-202ENST00000428444 1305 ntBASIC14.65□□□□□ -0.06
CHD8Q9HCK8 TUBB8P7-204ENST00000567960 1332 ntBASIC14.65□□□□□ -0.06
CHD8Q9HCK8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 AC073130.3-201ENST00000624389 2278 ntBASIC14.65□□□□□ -0.06
CHD8Q9HCK8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHD8Q9HCK8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 AC244157.2-201ENST00000616239 1006 ntBASIC14.64□□□□□ -0.07
CHD8Q9HCK8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHD8Q9HCK8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms