Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 MRPS18AP1-201ENST00000414458 589 ntBASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 LINC02084-201ENST00000606069 1096 ntBASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 CYP4F24P-201ENST00000586049 1580 ntBASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.67■□□□□ 0.58
VAT1LQ9HCJ6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 MIR661-201ENST00000384842 89 ntBASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 AC087499.5-201ENST00000452760 1342 ntBASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 AL596087.1-201ENST00000400979 1969 ntBASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 KRT8P12-202ENST00000472924 1397 ntBASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 AL118508.1-201ENST00000613502 2345 ntBASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAT1LQ9HCJ6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 AC236430.1-201ENST00000402231 743 ntBASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 MIR3197-201ENST00000582241 73 ntBASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAT1LQ9HCJ6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
VAT1LQ9HCJ6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAT1LQ9HCJ6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAT1LQ9HCJ6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
VAT1LQ9HCJ6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms