Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 DGCR5-201ENST00000399539 862 ntBASIC18.73■□□□□ 0.59
SH2D4AQ9H788 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH2D4AQ9H788 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 RN7SL752P-201ENST00000463779 287 ntBASIC18.72■□□□□ 0.59
SH2D4AQ9H788 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AC023310.3-201ENST00000557027 670 ntBASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AC100756.1-201ENST00000562736 682 ntBASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AC138749.3-201ENST00000567691 622 ntBASIC18.72■□□□□ 0.59
SH2D4AQ9H788 CHCHD2P3-201ENST00000603038 451 ntBASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AC116165.1-201ENST00000611806 668 ntBASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 KRT8P37-201ENST00000451609 1420 ntBASIC18.72■□□□□ 0.59
SH2D4AQ9H788 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH2D4AQ9H788 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH2D4AQ9H788 MEIS3P1-201ENST00000495167 958 ntBASIC18.71■□□□□ 0.59
SH2D4AQ9H788 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms