Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 AC098850.1-201ENST00000419919 790 ntBASIC18.68■□□□□ 0.58
CCDC17Q96LX7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 RN7SL399P-201ENST00000471648 279 ntBASIC18.68■□□□□ 0.58
CCDC17Q96LX7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 HNRNPUP1-201ENST00000554987 333 ntBASIC18.68■□□□□ 0.58
CCDC17Q96LX7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 CTBP2P3-201ENST00000585629 1255 ntBASIC18.68■□□□□ 0.58
CCDC17Q96LX7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 PRORSD1P-202ENST00000563365 2154 ntBASIC18.68■□□□□ 0.58
CCDC17Q96LX7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 AC020916.1-201ENST00000587762 1774 ntBASIC18.68■□□□□ 0.58
CCDC17Q96LX7 MTHFR-217ENST00000641820 1569 ntBASIC18.68■□□□□ 0.58
CCDC17Q96LX7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 GK-202ENST00000378941 458 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 INE1-201ENST00000456273 945 ntBASIC18.67■□□□□ 0.58
CCDC17Q96LX7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 PCDHA12-202ENST00000613593 2588 ntBASIC18.67■□□□□ 0.58
CCDC17Q96LX7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC17Q96LX7 AC011477.6-201ENST00000604980 1927 ntBASIC18.66■□□□□ 0.58
CCDC17Q96LX7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 AL512384.1-201ENST00000406683 331 ntBASIC18.66■□□□□ 0.58
CCDC17Q96LX7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 AC036164.1-201ENST00000570544 333 ntBASIC18.66■□□□□ 0.58
CCDC17Q96LX7 AC097359.3-201ENST00000603982 1210 ntBASIC18.66■□□□□ 0.58
CCDC17Q96LX7 AL158212.4-201ENST00000624062 1286 ntBASIC18.66■□□□□ 0.58
CCDC17Q96LX7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC17Q96LX7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms