Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 AC074338.1-201ENST00000416825 156 ntBASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 KRT18P64-201ENST00000434946 1219 ntBASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 EEF1DP4-201ENST00000446006 880 ntBASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 AC100757.4-201ENST00000626934 759 ntBASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 MIR4321-201ENST00000592276 80 ntBASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 AL133466.1-201ENST00000447582 150 ntBASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRUNE2Q8WUY3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 AL354989.2-201ENST00000435838 1540 ntBASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 AC026410.1-201ENST00000507366 1101 ntBASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.46■□□□□ 0.23
PRUNE2Q8WUY3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRUNE2Q8WUY3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PRUNE2Q8WUY3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.22
PRUNE2Q8WUY3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRUNE2Q8WUY3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.45■□□□□ 0.22
PRUNE2Q8WUY3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRUNE2Q8WUY3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRUNE2Q8WUY3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRUNE2Q8WUY3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms