Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC106872.11-201ENST00000605838 421 ntBASIC19.32■□□□□ 0.68
SNED1Q8TER0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 AC091271.1-201ENST00000611877 1162 ntBASIC19.32■□□□□ 0.68
SNED1Q8TER0 AL607033.1-201ENST00000623900 1599 ntBASIC19.32■□□□□ 0.68
SNED1Q8TER0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 AL138709.1-201ENST00000614840 1693 ntBASIC19.32■□□□□ 0.68
SNED1Q8TER0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 AC106886.4-201ENST00000623557 2502 ntBASIC19.31■□□□□ 0.68
SNED1Q8TER0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 ELK2AP-201ENST00000392510 1007 ntBASIC19.31■□□□□ 0.68
SNED1Q8TER0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 AL591846.1-201ENST00000451736 433 ntBASIC19.31■□□□□ 0.68
SNED1Q8TER0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.31■□□□□ 0.68
SNED1Q8TER0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNED1Q8TER0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNED1Q8TER0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 ACKR1-201ENST00000368121 1240 ntBASIC19.3■□□□□ 0.68
SNED1Q8TER0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 AC078819.1-201ENST00000547454 765 ntBASIC19.3■□□□□ 0.68
SNED1Q8TER0 AC012085.1-201ENST00000548270 765 ntBASIC19.3■□□□□ 0.68
SNED1Q8TER0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.3■□□□□ 0.68
SNED1Q8TER0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNED1Q8TER0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 FAM197Y7-201ENST00000432892 766 ntBASIC19.29■□□□□ 0.68
SNED1Q8TER0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 PHKG1P2-201ENST00000457537 863 ntBASIC19.29■□□□□ 0.68
SNED1Q8TER0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNED1Q8TER0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.29■□□□□ 0.68
SNED1Q8TER0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms