Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 AC084346.2-201ENST00000607097 949 ntBASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 GPR182-203ENST00000622922 591 ntBASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 AC011676.5-201ENST00000624864 2660 ntBASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 PDIA3P1-201ENST00000471856 1510 ntBASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 AC036164.1-201ENST00000570544 333 ntBASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 AC133539.2-201ENST00000604757 467 ntBASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 CU634019.7-201ENST00000624153 1185 ntBASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 FP236241.2-201ENST00000624906 1185 ntBASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TMEFF1Q8IYR6 AC092171.3-201ENST00000610122 2651 ntBASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms