Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 BNIP3P29-201ENST00000598302 571 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 AC011447.5-201ENST00000616168 564 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 RNF216P1-203ENST00000404404 2427 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 KRT8P37-201ENST00000451609 1420 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 AC078925.2-201ENST00000624013 1973 ntBASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 AL162726.2-201ENST00000438986 1017 ntBASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 AC245100.5-201ENST00000452108 331 ntBASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 CU634019.7-201ENST00000624153 1185 ntBASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 FP236241.2-201ENST00000624906 1185 ntBASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 KRT8P22-201ENST00000562317 1415 ntBASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS3Q8IXF0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NPAS3Q8IXF0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 SLC25A47P1-201ENST00000531577 414 ntBASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 MIR5189-201ENST00000577370 114 ntBASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 AC133539.2-201ENST00000604757 467 ntBASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 AL592424.1-201ENST00000563624 1536 ntBASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 OR6D1P-203ENST00000641209 4860 ntBASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms