Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 KRT8P13-201ENST00000463294 1010 ntBASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 ZNF767P-206ENST00000513792 565 ntBASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 AC026410.3-201ENST00000514280 936 ntBASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 AC023310.1-201ENST00000554836 735 ntBASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 C2orf69P2-201ENST00000562032 1123 ntBASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 AL121723.1-201ENST00000445194 1519 ntBASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 REXO1L1P-202ENST00000608646 1974 ntBASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 AC078925.2-201ENST00000624013 1973 ntBASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 AC093813.1-201ENST00000605066 256 ntBASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNKSR3Q6P9H4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 AC004945.1-201ENST00000416738 983 ntBASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 FAM86HP-204ENST00000513466 959 ntBASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 AL118558.3-201ENST00000607414 1079 ntBASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.12■□□□□ 0.33
CNKSR3Q6P9H4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms