Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 PHKG1P2-201ENST00000457537 863 ntBASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 AC012313.1-201ENST00000593393 3059 ntBASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 ME2P1-201ENST00000426028 1970 ntBASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 AC016629.1-201ENST00000596579 586 ntBASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13DQ5THJ4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 HINT2P1-201ENST00000419438 481 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 YBX1P6-201ENST00000442962 1002 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC018695.7-201ENST00000624587 2492 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 MIR33B-201ENST00000385104 96 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 SERPINA13P-202ENST00000478994 924 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13DQ5THJ4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13DQ5THJ4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
VPS13DQ5THJ4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13DQ5THJ4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC10.58□□□□□ -0.72
VPS13DQ5THJ4 RN7SL769P-201ENST00000469386 295 ntBASIC10.58□□□□□ -0.72
VPS13DQ5THJ4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms