Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 ENPP7P5-201ENST00000541031 1031 ntBASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 AL022328.1-201ENST00000610050 478 ntBASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM71Q2Q1W2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 INTS4P2-202ENST00000614726 2019 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 AC136604.1-201ENST00000418535 575 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 AC134915.1-201ENST00000426461 574 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 BCRP2-202ENST00000447763 634 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 BCRP6-201ENST00000510112 632 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 BCRP7-201ENST00000511549 544 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 SLED1-202ENST00000512051 380 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 HNRNPUP1-201ENST00000554987 333 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 CLUHP6-201ENST00000580789 941 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 AL606495.2-201ENST00000605867 535 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 NFIC-211ENST00000641145 8399 ntBASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM71Q2Q1W2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
TRIM71Q2Q1W2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms