Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 AC106886.1-201ENST00000568660 600 ntBASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 PCDHA14-201ENST00000506751 2298 ntBASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SHROOM1Q2M3G4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 LINC02199-201ENST00000506655 2702 ntBASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 AC007389.4-201ENST00000454674 793 ntBASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 AL359711.2-201ENST00000563105 872 ntBASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 AC097359.3-201ENST00000603982 1210 ntBASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.65■□□□□ 0.58
SHROOM1Q2M3G4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SHROOM1Q2M3G4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHROOM1Q2M3G4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
SHROOM1Q2M3G4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHROOM1Q2M3G4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SHROOM1Q2M3G4 AL607033.1-201ENST00000623900 1599 ntBASIC18.64■□□□□ 0.58
SHROOM1Q2M3G4 AC018695.7-201ENST00000624587 2492 ntBASIC18.64■□□□□ 0.58
SHROOM1Q2M3G4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 RPS2P32-201ENST00000439199 892 ntBASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.64■□□□□ 0.57
SHROOM1Q2M3G4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 AC006449.6-201ENST00000612330 2296 ntBASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.63■□□□□ 0.57
SHROOM1Q2M3G4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms