Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TFF3Q07654 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.15□□□□□ -0.14
TFF3Q07654 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.15□□□□□ -0.14
TFF3Q07654 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.15□□□□□ -0.14
TFF3Q07654 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.15□□□□□ -0.14
TFF3Q07654 AC007389.4-201ENST00000454674 793 ntBASIC14.15□□□□□ -0.14
TFF3Q07654 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.15□□□□□ -0.14
TFF3Q07654 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.15□□□□□ -0.14
TFF3Q07654 AC074044.1-201ENST00000609673 707 ntBASIC14.15□□□□□ -0.14
TFF3Q07654 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.15□□□□□ -0.14
TFF3Q07654 AL033527.4-201ENST00000641026 673 ntBASIC14.15□□□□□ -0.14
TFF3Q07654 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.15□□□□□ -0.14
TFF3Q07654 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 GGT4P-201ENST00000623672 1708 ntBASIC14.15□□□□□ -0.14
TFF3Q07654 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TFF3Q07654 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TFF3Q07654 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.15□□□□□ -0.15
TFF3Q07654 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.14□□□□□ -0.15
TFF3Q07654 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.14□□□□□ -0.15
TFF3Q07654 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 AC046158.3-201ENST00000624947 2558 ntBASIC14.14□□□□□ -0.15
TFF3Q07654 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TFF3Q07654 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TFF3Q07654 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.14□□□□□ -0.15
TFF3Q07654 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.14□□□□□ -0.15
TFF3Q07654 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.14□□□□□ -0.15
TFF3Q07654 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.14□□□□□ -0.15
TFF3Q07654 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
TFF3Q07654 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TFF3Q07654 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.14□□□□□ -0.15
TFF3Q07654 AC025048.3-201ENST00000590609 569 ntBASIC14.14□□□□□ -0.15
TFF3Q07654 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.14□□□□□ -0.15
TFF3Q07654 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TFF3Q07654 AC005702.4-201ENST00000618393 416 ntBASIC14.14□□□□□ -0.15
TFF3Q07654 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TFF3Q07654 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TFF3Q07654 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TFF3Q07654 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TFF3Q07654 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TFF3Q07654 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TFF3Q07654 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TFF3Q07654 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TFF3Q07654 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.13□□□□□ -0.15
TFF3Q07654 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.13□□□□□ -0.15
TFF3Q07654 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TFF3Q07654 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms