Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SRPXP78539 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 PTCHD3P3-201ENST00000403073 906 ntBASIC13.35□□□□□ -0.27
SRPXP78539 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 NUS1P2-201ENST00000417358 873 ntBASIC13.35□□□□□ -0.27
SRPXP78539 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.35□□□□□ -0.27
SRPXP78539 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.35□□□□□ -0.27
SRPXP78539 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.35□□□□□ -0.27
SRPXP78539 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.35□□□□□ -0.27
SRPXP78539 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SRPXP78539 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.35□□□□□ -0.27
SRPXP78539 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.35□□□□□ -0.27
SRPXP78539 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 AL009178.2-201ENST00000597278 2719 ntBASIC13.34□□□□□ -0.27
SRPXP78539 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SRPXP78539 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SRPXP78539 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 DUX4L26-201ENST00000489078 1255 ntBASIC13.34□□□□□ -0.27
SRPXP78539 AC093827.2-201ENST00000512654 315 ntBASIC13.34□□□□□ -0.27
SRPXP78539 AC106795.1-205ENST00000512851 1056 ntBASIC13.34□□□□□ -0.27
SRPXP78539 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 NKAPP1-205ENST00000585790 367 ntBASIC13.34□□□□□ -0.27
SRPXP78539 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SRPXP78539 AC099336.1-202ENST00000602961 463 ntBASIC13.34□□□□□ -0.27
SRPXP78539 GGTLC5P-201ENST00000617623 998 ntBASIC13.34□□□□□ -0.27
SRPXP78539 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.34□□□□□ -0.27
SRPXP78539 AC004706.3-202ENST00000621574 984 ntBASIC13.34□□□□□ -0.27
SRPXP78539 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.34□□□□□ -0.27
SRPXP78539 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.34□□□□□ -0.27
SRPXP78539 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SRPXP78539 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRPXP78539 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.34□□□□□ -0.27
SRPXP78539 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.33□□□□□ -0.27
SRPXP78539 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRPXP78539 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRPXP78539 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRPXP78539 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
SRPXP78539 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRPXP78539 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.33□□□□□ -0.27
SRPXP78539 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRPXP78539 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.33□□□□□ -0.28
SRPXP78539 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRPXP78539 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.33□□□□□ -0.28
SRPXP78539 AP003680.1-201ENST00000598970 3660 ntBASIC13.33□□□□□ -0.28
SRPXP78539 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRPXP78539 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRPXP78539 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRPXP78539 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms