Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CCNA1P78396 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCNA1P78396 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCNA1P78396 C1QBPP1-201ENST00000400117 770 ntBASIC18.19■□□□□ 0.5
CCNA1P78396 BRWD1P1-201ENST00000401091 371 ntBASIC18.19■□□□□ 0.5
CCNA1P78396 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCNA1P78396 AC099336.1-201ENST00000417053 1171 ntBASIC18.19■□□□□ 0.5
CCNA1P78396 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.19■□□□□ 0.5
CCNA1P78396 CSF2RBP1-201ENST00000447905 391 ntBASIC18.19■□□□□ 0.5
CCNA1P78396 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.19■□□□□ 0.5
CCNA1P78396 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.19■□□□□ 0.5
CCNA1P78396 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.19■□□□□ 0.5
CCNA1P78396 AP001889.1-201ENST00000525414 633 ntBASIC18.19■□□□□ 0.5
CCNA1P78396 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.19■□□□□ 0.5
CCNA1P78396 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.19■□□□□ 0.5
CCNA1P78396 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
CCNA1P78396 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCNA1P78396 AL049840.4-201ENST00000602422 811 ntBASIC18.19■□□□□ 0.5
CCNA1P78396 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.19■□□□□ 0.5
CCNA1P78396 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCNA1P78396 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCNA1P78396 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 AP001282.1-201ENST00000531301 1499 ntBASIC18.19■□□□□ 0.5
CCNA1P78396 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCNA1P78396 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 AL133338.1-201ENST00000565695 1517 ntBASIC18.18■□□□□ 0.5
CCNA1P78396 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNA1P78396 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNA1P78396 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.18■□□□□ 0.5
CCNA1P78396 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 PHKG1P2-201ENST00000457537 863 ntBASIC18.18■□□□□ 0.5
CCNA1P78396 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNA1P78396 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNA1P78396 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.18■□□□□ 0.5
CCNA1P78396 AC120045.2-201ENST00000567334 178 ntBASIC18.18■□□□□ 0.5
CCNA1P78396 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.18■□□□□ 0.5
CCNA1P78396 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCNA1P78396 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.18■□□□□ 0.5
CCNA1P78396 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCNA1P78396 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.18■□□□□ 0.5
CCNA1P78396 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCNA1P78396 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.17■□□□□ 0.5
CCNA1P78396 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCNA1P78396 FZD10-202ENST00000539839 3282 ntBASIC18.17■□□□□ 0.5
CCNA1P78396 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCNA1P78396 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCNA1P78396 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCNA1P78396 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms