Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.23□□□□□ -0.29
SPCS3P61009 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.23□□□□□ -0.29
SPCS3P61009 AC006557.2-201ENST00000592985 1240 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 AL732292.2-201ENST00000609649 430 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 PGM5P2-202ENST00000637225 1043 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS3P61009 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SPCS3P61009 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SPCS3P61009 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 AL161772.1-201ENST00000610494 4412 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.23□□□□□ -0.29
SPCS3P61009 AL592424.1-201ENST00000563624 1536 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.23□□□□□ -0.29
SPCS3P61009 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPCS3P61009 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.23□□□□□ -0.29
SPCS3P61009 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPCS3P61009 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
SPCS3P61009 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SPCS3P61009 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SPCS3P61009 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SPCS3P61009 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.22□□□□□ -0.29
SPCS3P61009 FOSL1P1-201ENST00000511041 816 ntBASIC13.22□□□□□ -0.29
SPCS3P61009 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.22□□□□□ -0.29
SPCS3P61009 AC091076.1-201ENST00000610741 619 ntBASIC13.22□□□□□ -0.29
SPCS3P61009 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SPCS3P61009 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.22□□□□□ -0.29
SPCS3P61009 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
SPCS3P61009 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SPCS3P61009 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPCS3P61009 AC005622.1-201ENST00000636801 1703 ntBASIC13.22□□□□□ -0.29
SPCS3P61009 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 AC006504.4-201ENST00000592118 1568 ntBASIC13.21□□□□□ -0.29
SPCS3P61009 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SPCS3P61009 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 ARMC10P1-201ENST00000313754 855 ntBASIC13.21□□□□□ -0.29
SPCS3P61009 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.21□□□□□ -0.29
SPCS3P61009 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.21□□□□□ -0.29
SPCS3P61009 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.21□□□□□ -0.29
SPCS3P61009 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 SART3-203ENST00000546611 1184 ntBASIC13.21□□□□□ -0.29
SPCS3P61009 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms