Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CLDN6P56747 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.43■□□□□ 0.06
CLDN6P56747 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN6P56747 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN6P56747 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN6P56747 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN6P56747 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN6P56747 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CLDN6P56747 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN6P56747 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLDN6P56747 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLDN6P56747 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN6P56747 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN6P56747 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.42■□□□□ 0.06
CLDN6P56747 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 BRWD1P1-201ENST00000401091 371 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 BOLA2P3-201ENST00000404566 256 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 HAUS4P1-201ENST00000406739 1145 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.42■□□□□ 0.06
CLDN6P56747 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN6P56747 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN6P56747 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN6P56747 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.42■□□□□ 0.06
CLDN6P56747 TDH-203ENST00000531764 1110 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN6P56747 RRP7BP-205ENST00000566851 833 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN6P56747 MIR5189-201ENST00000577370 114 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.42■□□□□ 0.06
CLDN6P56747 AC020765.3-201ENST00000613051 740 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 CU634019.7-201ENST00000624153 1185 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 FP236241.2-201ENST00000624906 1185 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CLDN6P56747 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLDN6P56747 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLDN6P56747 AC022211.2-201ENST00000585075 2527 ntBASIC15.42■□□□□ 0.06
CLDN6P56747 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN6P56747 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 AC060834.1-201ENST00000443027 2032 ntBASIC15.41■□□□□ 0.06
CLDN6P56747 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN6P56747 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 RN7SL399P-201ENST00000471648 279 ntBASIC15.41■□□□□ 0.06
CLDN6P56747 AC108725.1-201ENST00000495472 409 ntBASIC15.41■□□□□ 0.06
CLDN6P56747 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 AC244093.1-201ENST00000610837 814 ntBASIC15.41■□□□□ 0.06
CLDN6P56747 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.41■□□□□ 0.06
CLDN6P56747 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.41■□□□□ 0.06
CLDN6P56747 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN6P56747 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CLDN6P56747 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN6P56747 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms