Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH4P55283 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.44■□□□□ 0.22
CDH4P55283 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH4P55283 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.44■□□□□ 0.22
CDH4P55283 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH4P55283 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH4P55283 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH4P55283 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
CDH4P55283 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH4P55283 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDH4P55283 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH4P55283 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 MRPS18AP1-201ENST00000414458 589 ntBASIC16.43■□□□□ 0.22
CDH4P55283 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.43■□□□□ 0.22
CDH4P55283 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
CDH4P55283 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDH4P55283 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH4P55283 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CDH4P55283 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH4P55283 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 AC011477.6-201ENST00000604980 1927 ntBASIC16.43■□□□□ 0.22
CDH4P55283 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH4P55283 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH4P55283 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 AC069224.1-201ENST00000566372 1715 ntBASIC16.42■□□□□ 0.22
CDH4P55283 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDH4P55283 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH4P55283 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH4P55283 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH4P55283 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH4P55283 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH4P55283 AC009407.1-201ENST00000568958 598 ntBASIC16.42■□□□□ 0.22
CDH4P55283 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH4P55283 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH4P55283 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 REXO1L1P-202ENST00000608646 1974 ntBASIC16.42■□□□□ 0.22
CDH4P55283 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH4P55283 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH4P55283 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 BTBD7P1-201ENST00000447253 1453 ntBASIC16.42■□□□□ 0.22
CDH4P55283 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms