Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.75■□□□□ 0.43
PMS1P54277 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PMS1P54277 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
PMS1P54277 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PMS1P54277 AC092127.1-201ENST00000567093 3455 ntBASIC17.74■□□□□ 0.43
PMS1P54277 AC009090.5-201ENST00000624886 2285 ntBASIC17.74■□□□□ 0.43
PMS1P54277 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PMS1P54277 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 AC020658.6-201ENST00000623564 1870 ntBASIC17.74■□□□□ 0.43
PMS1P54277 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PMS1P54277 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 MIR346-201ENST00000362234 95 ntBASIC17.74■□□□□ 0.43
PMS1P54277 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.74■□□□□ 0.43
PMS1P54277 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 ALG1L5P-201ENST00000482043 771 ntBASIC17.74■□□□□ 0.43
PMS1P54277 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.74■□□□□ 0.43
PMS1P54277 AC079140.1-201ENST00000508039 487 ntBASIC17.74■□□□□ 0.43
PMS1P54277 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.74■□□□□ 0.43
PMS1P54277 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.74■□□□□ 0.43
PMS1P54277 AC040169.1-201ENST00000565382 521 ntBASIC17.74■□□□□ 0.43
PMS1P54277 AP000842.3-202ENST00000569238 1080 ntBASIC17.74■□□□□ 0.43
PMS1P54277 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PMS1P54277 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PMS1P54277 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PMS1P54277 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 BNIP3P1-202ENST00000550043 1585 ntBASIC17.74■□□□□ 0.43
PMS1P54277 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PMS1P54277 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PMS1P54277 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PMS1P54277 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.73■□□□□ 0.43
PMS1P54277 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.73■□□□□ 0.43
PMS1P54277 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 AL691432.1-201ENST00000596308 1422 ntBASIC17.73■□□□□ 0.43
PMS1P54277 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PMS1P54277 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.73■□□□□ 0.43
PMS1P54277 AL136982.4-201ENST00000437689 1740 ntBASIC17.73■□□□□ 0.43
PMS1P54277 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PMS1P54277 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 AC011270.2-201ENST00000624293 2550 ntBASIC17.73■□□□□ 0.43
PMS1P54277 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PMS1P54277 YBX2P1-201ENST00000394192 760 ntBASIC17.73■□□□□ 0.43
PMS1P54277 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.73■□□□□ 0.43
PMS1P54277 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.73■□□□□ 0.43
PMS1P54277 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.73■□□□□ 0.43
PMS1P54277 KRT18P58-201ENST00000527480 1120 ntBASIC17.73■□□□□ 0.43
PMS1P54277 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.73■□□□□ 0.43
PMS1P54277 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.73■□□□□ 0.43
PMS1P54277 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.73■□□□□ 0.43
PMS1P54277 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PMS1P54277 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PMS1P54277 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
PMS1P54277 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PMS1P54277 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PMS1P54277 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms