Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDK7P50613 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 AC020907.1-201ENST00000616460 1350 ntBASIC17.74■□□□□ 0.43
CDK7P50613 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDK7P50613 AC006538.1-201ENST00000567905 1585 ntBASIC17.74■□□□□ 0.43
CDK7P50613 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDK7P50613 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.73■□□□□ 0.43
CDK7P50613 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CDK7P50613 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK7P50613 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK7P50613 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK7P50613 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK7P50613 TDH-203ENST00000531764 1110 ntBASIC17.73■□□□□ 0.43
CDK7P50613 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.73■□□□□ 0.43
CDK7P50613 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.73■□□□□ 0.43
CDK7P50613 PCGF3-213ENST00000620529 1899 ntBASIC17.73■□□□□ 0.43
CDK7P50613 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDK7P50613 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK7P50613 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.72■□□□□ 0.43
CDK7P50613 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
CDK7P50613 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDK7P50613 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.72■□□□□ 0.43
CDK7P50613 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 AC005229.1-201ENST00000392885 409 ntBASIC17.72■□□□□ 0.43
CDK7P50613 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 RPL7P3-201ENST00000441388 714 ntBASIC17.72■□□□□ 0.43
CDK7P50613 EEF1DP4-201ENST00000446006 880 ntBASIC17.72■□□□□ 0.43
CDK7P50613 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.72■□□□□ 0.43
CDK7P50613 AL359711.2-201ENST00000563105 872 ntBASIC17.72■□□□□ 0.43
CDK7P50613 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDK7P50613 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDK7P50613 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK7P50613 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.71■□□□□ 0.43
CDK7P50613 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDK7P50613 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDK7P50613 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK7P50613 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK7P50613 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK7P50613 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK7P50613 AP000812.2-201ENST00000538934 718 ntBASIC17.71■□□□□ 0.43
CDK7P50613 ENPP7P5-201ENST00000541031 1031 ntBASIC17.71■□□□□ 0.43
CDK7P50613 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK7P50613 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK7P50613 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.71■□□□□ 0.43
CDK7P50613 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK7P50613 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK7P50613 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms