Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.72□□□□□ -0.05
CENPAP49450 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.72□□□□□ -0.05
CENPAP49450 MIR648-201ENST00000385046 94 ntBASIC14.72□□□□□ -0.05
CENPAP49450 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.72□□□□□ -0.05
CENPAP49450 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.72□□□□□ -0.05
CENPAP49450 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.72□□□□□ -0.05
CENPAP49450 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 AC108751.1-201ENST00000490852 363 ntBASIC14.72□□□□□ -0.05
CENPAP49450 AC093909.1-201ENST00000504731 1122 ntBASIC14.72□□□□□ -0.05
CENPAP49450 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.72□□□□□ -0.05
CENPAP49450 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.72□□□□□ -0.05
CENPAP49450 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 AL773604.1-201ENST00000617417 272 ntBASIC14.72□□□□□ -0.05
CENPAP49450 AL031008.1-201ENST00000619963 541 ntBASIC14.72□□□□□ -0.05
CENPAP49450 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 AC007950.2-201ENST00000615045 2347 ntBASIC14.72□□□□□ -0.05
CENPAP49450 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CENPAP49450 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.71□□□□□ -0.05
CENPAP49450 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.71□□□□□ -0.05
CENPAP49450 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CENPAP49450 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 AL450487.1-201ENST00000426799 995 ntBASIC14.71□□□□□ -0.05
CENPAP49450 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.71□□□□□ -0.05
CENPAP49450 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 MIR3909-201ENST00000579518 119 ntBASIC14.71□□□□□ -0.05
CENPAP49450 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CENPAP49450 AC021097.1-201ENST00000607902 574 ntBASIC14.71□□□□□ -0.05
CENPAP49450 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.71□□□□□ -0.05
CENPAP49450 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CENPAP49450 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CENPAP49450 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.71□□□□□ -0.05
CENPAP49450 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CENPAP49450 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.71□□□□□ -0.06
CENPAP49450 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CENPAP49450 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.71□□□□□ -0.06
CENPAP49450 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.71□□□□□ -0.06
CENPAP49450 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.71□□□□□ -0.06
CENPAP49450 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.7□□□□□ -0.06
CENPAP49450 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CENPAP49450 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms