Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KRT6CP48668 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
KRT6CP48668 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6CP48668 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6CP48668 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6CP48668 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KRT6CP48668 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6CP48668 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 WASH6P-202ENST00000359512 1437 ntBASIC15.71■□□□□ 0.11
KRT6CP48668 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6CP48668 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KRT6CP48668 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KRT6CP48668 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6CP48668 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 AC073439.1-201ENST00000624121 1774 ntBASIC15.71■□□□□ 0.11
KRT6CP48668 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.71■□□□□ 0.11
KRT6CP48668 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KRT6CP48668 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6CP48668 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6CP48668 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6CP48668 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6CP48668 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.71■□□□□ 0.1
KRT6CP48668 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6CP48668 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.71■□□□□ 0.1
KRT6CP48668 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
KRT6CP48668 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6CP48668 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6CP48668 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6CP48668 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.71■□□□□ 0.1
KRT6CP48668 AC008677.1-201ENST00000519230 1561 ntBASIC15.7■□□□□ 0.1
KRT6CP48668 PMS2P7-201ENST00000506558 1336 ntBASIC15.7■□□□□ 0.1
KRT6CP48668 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.7■□□□□ 0.1
KRT6CP48668 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
KRT6CP48668 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 PRAL-201ENST00000624952 3286 ntBASIC15.7■□□□□ 0.1
KRT6CP48668 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT6CP48668 RPL13AP23-201ENST00000480739 586 ntBASIC15.7■□□□□ 0.1
KRT6CP48668 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT6CP48668 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT6CP48668 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT6CP48668 AC068137.2-201ENST00000605408 478 ntBASIC15.7■□□□□ 0.1
KRT6CP48668 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.7■□□□□ 0.1
KRT6CP48668 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT6CP48668 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRT6CP48668 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KRT6CP48668 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
KRT6CP48668 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT6CP48668 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT6CP48668 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT6CP48668 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms