Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC6A12P48065 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC6A12P48065 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SLC6A12P48065 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A12P48065 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SLC6A12P48065 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A12P48065 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC6A12P48065 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
SLC6A12P48065 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 AC254562.1-201ENST00000417586 456 ntBASIC15.52■□□□□ 0.08
SLC6A12P48065 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A12P48065 RBPMS2P1-201ENST00000437762 623 ntBASIC15.52■□□□□ 0.08
SLC6A12P48065 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SLC6A12P48065 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC6A12P48065 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC6A12P48065 AC026150.2-201ENST00000564693 1156 ntBASIC15.52■□□□□ 0.08
SLC6A12P48065 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC6A12P48065 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC6A12P48065 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A12P48065 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A12P48065 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SLC6A12P48065 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.52■□□□□ 0.07
SLC6A12P48065 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC6A12P48065 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC6A12P48065 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SLC6A12P48065 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A12P48065 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.52■□□□□ 0.07
SLC6A12P48065 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SLC6A12P48065 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 AL353705.2-201ENST00000428243 662 ntBASIC15.51■□□□□ 0.07
SLC6A12P48065 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.51■□□□□ 0.07
SLC6A12P48065 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A12P48065 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A12P48065 AC105021.1-202ENST00000570572 669 ntBASIC15.51■□□□□ 0.07
SLC6A12P48065 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC6A12P48065 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A12P48065 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A12P48065 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A12P48065 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SLC6A12P48065 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.5■□□□□ 0.07
SLC6A12P48065 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 AP003680.1-201ENST00000598970 3660 ntBASIC15.5■□□□□ 0.07
SLC6A12P48065 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A12P48065 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC6A12P48065 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A12P48065 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A12P48065 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC6A12P48065 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC6A12P48065 MIR4313-201ENST00000580760 101 ntBASIC15.5■□□□□ 0.07
SLC6A12P48065 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC6A12P48065 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC6A12P48065 AC134684.3-201ENST00000641758 218 ntBASIC15.5■□□□□ 0.07
SLC6A12P48065 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC6A12P48065 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms