Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SOX11P35716 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 MTHFR-217ENST00000641820 1569 ntBASIC15.88■□□□□ 0.13
SOX11P35716 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SOX11P35716 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SOX11P35716 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX11P35716 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.88■□□□□ 0.13
SOX11P35716 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 LINC00895-201ENST00000629028 1637 ntBASIC15.88■□□□□ 0.13
SOX11P35716 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX11P35716 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX11P35716 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX11P35716 MKNK2P1-201ENST00000437526 628 ntBASIC15.88■□□□□ 0.13
SOX11P35716 DNAJB3-202ENST00000449667 1266 ntBASIC15.88■□□□□ 0.13
SOX11P35716 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX11P35716 KRT19P2-202ENST00000557173 1012 ntBASIC15.88■□□□□ 0.13
SOX11P35716 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
SOX11P35716 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX11P35716 AC004877.2-201ENST00000623941 599 ntBASIC15.88■□□□□ 0.13
SOX11P35716 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX11P35716 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX11P35716 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX11P35716 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX11P35716 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX11P35716 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX11P35716 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX11P35716 HTR5BP-201ENST00000430851 1154 ntBASIC15.87■□□□□ 0.13
SOX11P35716 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
SOX11P35716 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SOX11P35716 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.87■□□□□ 0.13
SOX11P35716 MIR4469-201ENST00000583919 79 ntBASIC15.87■□□□□ 0.13
SOX11P35716 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SOX11P35716 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SOX11P35716 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 BCAR1-209ENST00000546196 1340 ntBASIC15.87■□□□□ 0.13
SOX11P35716 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX11P35716 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX11P35716 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX11P35716 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX11P35716 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX11P35716 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX11P35716 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX11P35716 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX11P35716 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX11P35716 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms