Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX1P22670 KRT8P48-201ENST00000515599 1220 ntBASIC17.59■□□□□ 0.41
RFX1P22670 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX1P22670 AL008721.1-201ENST00000609964 604 ntBASIC17.59■□□□□ 0.41
RFX1P22670 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 AL358472.5-202ENST00000641448 1267 ntBASIC17.59■□□□□ 0.41
RFX1P22670 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFX1P22670 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX1P22670 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX1P22670 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFX1P22670 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.58■□□□□ 0.41
RFX1P22670 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RFX1P22670 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX1P22670 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RFX1P22670 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RFX1P22670 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.58■□□□□ 0.41
RFX1P22670 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.58■□□□□ 0.41
RFX1P22670 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.58■□□□□ 0.41
RFX1P22670 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RFX1P22670 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFX1P22670 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFX1P22670 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RFX1P22670 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RFX1P22670 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RFX1P22670 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.58■□□□□ 0.4
RFX1P22670 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RFX1P22670 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX1P22670 RBPMS2P1-201ENST00000437762 623 ntBASIC17.58■□□□□ 0.4
RFX1P22670 GAPDHP21-201ENST00000450301 1010 ntBASIC17.58■□□□□ 0.4
RFX1P22670 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX1P22670 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX1P22670 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.58■□□□□ 0.4
RFX1P22670 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX1P22670 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RFX1P22670 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX1P22670 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX1P22670 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX1P22670 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFX1P22670 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX1P22670 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.58■□□□□ 0.4
RFX1P22670 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RFX1P22670 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.58■□□□□ 0.4
RFX1P22670 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RFX1P22670 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 HAUS4P1-201ENST00000406739 1145 ntBASIC17.57■□□□□ 0.4
RFX1P22670 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 ADH5P3-201ENST00000433842 1137 ntBASIC17.57■□□□□ 0.4
RFX1P22670 FAM207CP-201ENST00000443486 507 ntBASIC17.57■□□□□ 0.4
RFX1P22670 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.57■□□□□ 0.4
RFX1P22670 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX1P22670 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 AC079140.1-201ENST00000508039 487 ntBASIC17.57■□□□□ 0.4
RFX1P22670 PRYP6-201ENST00000514804 343 ntBASIC17.57■□□□□ 0.4
RFX1P22670 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 SLC25A39P2-201ENST00000537614 270 ntBASIC17.57■□□□□ 0.4
RFX1P22670 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 LINC02560-201ENST00000596379 459 ntBASIC17.57■□□□□ 0.4
RFX1P22670 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 AC008894.3-201ENST00000624324 3103 ntBASIC17.57■□□□□ 0.4
RFX1P22670 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
RFX1P22670 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX1P22670 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RFX1P22670 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms