Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN1P18031 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN1P18031 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPN1P18031 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN1P18031 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN1P18031 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 FO393414.2-201ENST00000405153 598 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN1P18031 HIST3H2BA-201ENST00000436555 524 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN1P18031 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN1P18031 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN1P18031 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 RN7SL618P-201ENST00000477850 296 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 AC010336.2-201ENST00000564226 506 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN1P18031 MIR4745-201ENST00000577608 62 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN1P18031 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
PTPN1P18031 MIR6069-201ENST00000620069 79 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN1P18031 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN1P18031 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 AC134407.2-201ENST00000625089 1978 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 KRT8P37-201ENST00000451609 1420 ntBASIC17.04■□□□□ 0.32
PTPN1P18031 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN1P18031 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN1P18031 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN1P18031 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
PTPN1P18031 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN1P18031 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN1P18031 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PTPN1P18031 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.03■□□□□ 0.32
PTPN1P18031 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN1P18031 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN1P18031 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN1P18031 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN1P18031 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.03■□□□□ 0.32
PTPN1P18031 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTPN1P18031 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN1P18031 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN1P18031 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN1P18031 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PTPN1P18031 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN1P18031 AL162727.3-201ENST00000635661 2787 ntBASIC17.03■□□□□ 0.32
PTPN1P18031 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN1P18031 CYP2T1P-202ENST00000641596 2535 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms