Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.22■□□□□ 0.19
CTPS1P17812 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.22■□□□□ 0.19
CTPS1P17812 HAUS4P1-201ENST00000406739 1145 ntBASIC16.22■□□□□ 0.19
CTPS1P17812 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CTPS1P17812 TREML5P-201ENST00000421694 576 ntBASIC16.22■□□□□ 0.19
CTPS1P17812 AC107890.1-201ENST00000422478 521 ntBASIC16.22■□□□□ 0.19
CTPS1P17812 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.22■□□□□ 0.19
CTPS1P17812 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.22■□□□□ 0.19
CTPS1P17812 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.22■□□□□ 0.19
CTPS1P17812 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.22■□□□□ 0.19
CTPS1P17812 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.22■□□□□ 0.19
CTPS1P17812 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.22■□□□□ 0.19
CTPS1P17812 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
CTPS1P17812 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTPS1P17812 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.22■□□□□ 0.19
CTPS1P17812 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTPS1P17812 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTPS1P17812 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 AP003680.1-201ENST00000598970 3660 ntBASIC16.21■□□□□ 0.19
CTPS1P17812 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.21■□□□□ 0.19
CTPS1P17812 AC018695.7-201ENST00000624587 2492 ntBASIC16.21■□□□□ 0.19
CTPS1P17812 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.21■□□□□ 0.19
CTPS1P17812 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.21■□□□□ 0.19
CTPS1P17812 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 MIR943-201ENST00000401286 94 ntBASIC16.21■□□□□ 0.19
CTPS1P17812 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.21■□□□□ 0.19
CTPS1P17812 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.21■□□□□ 0.19
CTPS1P17812 CYMP-203ENST00000474680 1263 ntBASIC16.21■□□□□ 0.19
CTPS1P17812 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.21■□□□□ 0.19
CTPS1P17812 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.21■□□□□ 0.19
CTPS1P17812 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.21■□□□□ 0.19
CTPS1P17812 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.21■□□□□ 0.19
CTPS1P17812 AC015911.4-201ENST00000588022 1070 ntBASIC16.21■□□□□ 0.19
CTPS1P17812 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CTPS1P17812 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.21■□□□□ 0.19
CTPS1P17812 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CTPS1P17812 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.21■□□□□ 0.19
CTPS1P17812 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 FO538757.1-201ENST00000623083 1397 ntBASIC16.21■□□□□ 0.19
CTPS1P17812 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.21■□□□□ 0.19
CTPS1P17812 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS1P17812 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS1P17812 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
CTPS1P17812 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS1P17812 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS1P17812 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS1P17812 AC008741.2-201ENST00000612792 3115 ntBASIC16.21■□□□□ 0.18
CTPS1P17812 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS1P17812 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CTPS1P17812 AL391005.1-201ENST00000623953 2435 ntBASIC16.2■□□□□ 0.18
CTPS1P17812 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTPS1P17812 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS1P17812 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS1P17812 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTPS1P17812 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms