Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.69■□□□□ 0.58
PARP1P09874 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARP1P09874 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PARP1P09874 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.69■□□□□ 0.58
PARP1P09874 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.69■□□□□ 0.58
PARP1P09874 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.69■□□□□ 0.58
PARP1P09874 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.69■□□□□ 0.58
PARP1P09874 AC009477.1-201ENST00000452936 217 ntBASIC18.69■□□□□ 0.58
PARP1P09874 RN7SL618P-201ENST00000477850 296 ntBASIC18.69■□□□□ 0.58
PARP1P09874 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARP1P09874 AL512361.1-201ENST00000554200 418 ntBASIC18.69■□□□□ 0.58
PARP1P09874 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
PARP1P09874 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.69■□□□□ 0.58
PARP1P09874 AL033527.5-202ENST00000641632 1098 ntBASIC18.69■□□□□ 0.58
PARP1P09874 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.69■□□□□ 0.58
PARP1P09874 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARP1P09874 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PARP1P09874 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARP1P09874 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARP1P09874 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.69■□□□□ 0.58
PARP1P09874 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.69■□□□□ 0.58
PARP1P09874 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PARP1P09874 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 BNIP3P1-202ENST00000550043 1585 ntBASIC18.68■□□□□ 0.58
PARP1P09874 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.68■□□□□ 0.58
PARP1P09874 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PARP1P09874 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.68■□□□□ 0.58
PARP1P09874 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PARP1P09874 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARP1P09874 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PARP1P09874 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PARP1P09874 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.67■□□□□ 0.58
PARP1P09874 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PARP1P09874 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.67■□□□□ 0.58
PARP1P09874 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 MRPS18AP1-201ENST00000414458 589 ntBASIC18.67■□□□□ 0.58
PARP1P09874 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.67■□□□□ 0.58
PARP1P09874 AC010336.2-201ENST00000564226 506 ntBASIC18.67■□□□□ 0.58
PARP1P09874 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.67■□□□□ 0.58
PARP1P09874 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.67■□□□□ 0.58
PARP1P09874 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.67■□□□□ 0.58
PARP1P09874 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 MIR6069-201ENST00000620069 79 ntBASIC18.67■□□□□ 0.58
PARP1P09874 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.67■□□□□ 0.58
PARP1P09874 AC134407.2-201ENST00000625089 1978 ntBASIC18.67■□□□□ 0.58
PARP1P09874 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PARP1P09874 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.67■□□□□ 0.58
PARP1P09874 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARP1P09874 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms