Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ELK1P1-201ENST00000485699 580 ntBASIC18.91■□□□□ 0.62
HLA-DOAP06340 AC104596.2-201ENST00000512793 793 ntBASIC18.91■□□□□ 0.62
HLA-DOAP06340 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 IGHV3-72-202ENST00000621503 303 ntBASIC18.9■□□□□ 0.62
HLA-DOAP06340 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.9■□□□□ 0.62
HLA-DOAP06340 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DOAP06340 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DOAP06340 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DOAP06340 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.89■□□□□ 0.62
HLA-DOAP06340 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DOAP06340 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DOAP06340 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.89■□□□□ 0.62
HLA-DOAP06340 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DOAP06340 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DOAP06340 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DOAP06340 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DOAP06340 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-DOAP06340 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 AC006449.6-201ENST00000612330 2296 ntBASIC18.88■□□□□ 0.61
HLA-DOAP06340 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DOAP06340 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DOAP06340 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DOAP06340 AC098850.1-201ENST00000419919 790 ntBASIC18.88■□□□□ 0.61
HLA-DOAP06340 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DOAP06340 RPL13P2-201ENST00000440687 659 ntBASIC18.88■□□□□ 0.61
HLA-DOAP06340 TARDBPP1-201ENST00000442013 1203 ntBASIC18.88■□□□□ 0.61
HLA-DOAP06340 CTBP2P3-201ENST00000585629 1255 ntBASIC18.88■□□□□ 0.61
HLA-DOAP06340 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.88■□□□□ 0.61
HLA-DOAP06340 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DOAP06340 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DOAP06340 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms