Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC007967.4-201ENST00000614700 386 ntBASIC16.89■□□□□ 0.29
TRUB2O95900 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 TUBB3P1-201ENST00000405796 1332 ntBASIC16.89■□□□□ 0.29
TRUB2O95900 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.88■□□□□ 0.29
TRUB2O95900 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.88■□□□□ 0.29
TRUB2O95900 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.88■□□□□ 0.29
TRUB2O95900 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRUB2O95900 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.88■□□□□ 0.29
TRUB2O95900 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TRUB2O95900 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRUB2O95900 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRUB2O95900 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.88■□□□□ 0.29
TRUB2O95900 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.88■□□□□ 0.29
TRUB2O95900 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.88■□□□□ 0.29
TRUB2O95900 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.88■□□□□ 0.29
TRUB2O95900 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.88■□□□□ 0.29
TRUB2O95900 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.88■□□□□ 0.29
TRUB2O95900 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.88■□□□□ 0.29
TRUB2O95900 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.88■□□□□ 0.29
TRUB2O95900 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.88■□□□□ 0.29
TRUB2O95900 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.88■□□□□ 0.29
TRUB2O95900 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.88■□□□□ 0.29
TRUB2O95900 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.88■□□□□ 0.29
TRUB2O95900 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRUB2O95900 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRUB2O95900 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRUB2O95900 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRUB2O95900 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRUB2O95900 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 AC105917.1-201ENST00000506637 2539 ntBASIC16.87■□□□□ 0.29
TRUB2O95900 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRUB2O95900 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.87■□□□□ 0.29
TRUB2O95900 FAM86GP-201ENST00000448322 971 ntBASIC16.87■□□□□ 0.29
TRUB2O95900 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.87■□□□□ 0.29
TRUB2O95900 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.87■□□□□ 0.29
TRUB2O95900 AC067863.1-201ENST00000494933 530 ntBASIC16.87■□□□□ 0.29
TRUB2O95900 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.87■□□□□ 0.29
TRUB2O95900 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 BANF1P1-201ENST00000553684 263 ntBASIC16.87■□□□□ 0.29
TRUB2O95900 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.87■□□□□ 0.29
TRUB2O95900 AC105021.1-202ENST00000570572 669 ntBASIC16.87■□□□□ 0.29
TRUB2O95900 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.87■□□□□ 0.29
TRUB2O95900 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.87■□□□□ 0.29
TRUB2O95900 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRUB2O95900 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRUB2O95900 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.87■□□□□ 0.29
TRUB2O95900 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms