Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LTN1O94822 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.95■□□□□ 0.94
LTN1O94822 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.95■□□□□ 0.94
LTN1O94822 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LTN1O94822 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
LTN1O94822 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LTN1O94822 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 MIR326-201ENST00000362220 95 ntBASIC20.95■□□□□ 0.94
LTN1O94822 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 PFN1P12-201ENST00000455938 534 ntBASIC20.95■□□□□ 0.94
LTN1O94822 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.95■□□□□ 0.94
LTN1O94822 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.95■□□□□ 0.94
LTN1O94822 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.95■□□□□ 0.94
LTN1O94822 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTN1O94822 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTN1O94822 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.94■□□□□ 0.94
LTN1O94822 AC012313.1-201ENST00000593393 3059 ntBASIC20.94■□□□□ 0.94
LTN1O94822 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTN1O94822 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LTN1O94822 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTN1O94822 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTN1O94822 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.94■□□□□ 0.94
LTN1O94822 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LTN1O94822 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LTN1O94822 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.94■□□□□ 0.94
LTN1O94822 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.94■□□□□ 0.94
LTN1O94822 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LTN1O94822 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.94■□□□□ 0.94
LTN1O94822 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
LTN1O94822 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.94■□□□□ 0.94
LTN1O94822 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LTN1O94822 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.94■□□□□ 0.94
LTN1O94822 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LTN1O94822 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 MIR1202-201ENST00000408529 83 ntBASIC20.93■□□□□ 0.94
LTN1O94822 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.93■□□□□ 0.94
LTN1O94822 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.93■□□□□ 0.94
LTN1O94822 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.93■□□□□ 0.94
LTN1O94822 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.93■□□□□ 0.94
LTN1O94822 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.93■□□□□ 0.94
LTN1O94822 GAPDHP40-201ENST00000505218 1006 ntBASIC20.93■□□□□ 0.94
LTN1O94822 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.93■□□□□ 0.94
LTN1O94822 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
LTN1O94822 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LTN1O94822 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.93■□□□□ 0.94
LTN1O94822 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LTN1O94822 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.93■□□□□ 0.94
LTN1O94822 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.93■□□□□ 0.94
LTN1O94822 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 AL138709.1-201ENST00000614840 1693 ntBASIC20.93■□□□□ 0.94
LTN1O94822 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LTN1O94822 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LTN1O94822 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LTN1O94822 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTN1O94822 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LTN1O94822 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.92■□□□□ 0.94
LTN1O94822 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.92■□□□□ 0.94
LTN1O94822 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.92■□□□□ 0.94
LTN1O94822 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
LTN1O94822 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTN1O94822 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
LTN1O94822 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LTN1O94822 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LTN1O94822 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LTN1O94822 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTN1O94822 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.92■□□□□ 0.94
LTN1O94822 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.92■□□□□ 0.94
LTN1O94822 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LTN1O94822 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.92■□□□□ 0.94
LTN1O94822 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTN1O94822 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LTN1O94822 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
LTN1O94822 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.91■□□□□ 0.94
LTN1O94822 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.91■□□□□ 0.94
LTN1O94822 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.91■□□□□ 0.94
LTN1O94822 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 C2orf27AP3-201ENST00000434123 579 ntBASIC20.91■□□□□ 0.94
LTN1O94822 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.91■□□□□ 0.94
LTN1O94822 AL354718.3-201ENST00000616414 581 ntBASIC20.91■□□□□ 0.94
LTN1O94822 CR382287.1-201ENST00000623954 586 ntBASIC20.91■□□□□ 0.94
LTN1O94822 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.91■□□□□ 0.94
LTN1O94822 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.91■□□□□ 0.94
LTN1O94822 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.91■□□□□ 0.94
LTN1O94822 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTN1O94822 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms