Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.26■□□□□ 0.19
GPC4O75487 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.25■□□□□ 0.19
GPC4O75487 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GPC4O75487 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.25■□□□□ 0.19
GPC4O75487 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
GPC4O75487 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.25■□□□□ 0.19
GPC4O75487 PCGF3-213ENST00000620529 1899 ntBASIC16.25■□□□□ 0.19
GPC4O75487 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.25■□□□□ 0.19
GPC4O75487 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GPC4O75487 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.25■□□□□ 0.19
GPC4O75487 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.25■□□□□ 0.19
GPC4O75487 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.25■□□□□ 0.19
GPC4O75487 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 MTDHP5-201ENST00000598980 586 ntBASIC16.25■□□□□ 0.19
GPC4O75487 AC099522.2-201ENST00000607001 744 ntBASIC16.25■□□□□ 0.19
GPC4O75487 AL161645.1-201ENST00000622716 1255 ntBASIC16.25■□□□□ 0.19
GPC4O75487 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
GPC4O75487 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GPC4O75487 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 LINC01144-201ENST00000626198 1710 ntBASIC16.25■□□□□ 0.19
GPC4O75487 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GPC4O75487 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.25■□□□□ 0.19
GPC4O75487 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GPC4O75487 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
GPC4O75487 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 PCDHA3-202ENST00000532566 4594 ntBASIC16.24■□□□□ 0.19
GPC4O75487 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.24■□□□□ 0.19
GPC4O75487 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
GPC4O75487 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 YBX2P1-201ENST00000394192 760 ntBASIC16.24■□□□□ 0.19
GPC4O75487 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.24■□□□□ 0.19
GPC4O75487 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.24■□□□□ 0.19
GPC4O75487 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.24■□□□□ 0.19
GPC4O75487 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
GPC4O75487 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.24■□□□□ 0.19
GPC4O75487 AC091812.2-201ENST00000619081 385 ntBASIC16.24■□□□□ 0.19
GPC4O75487 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.24■□□□□ 0.19
GPC4O75487 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
GPC4O75487 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.24■□□□□ 0.19
GPC4O75487 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GPC4O75487 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GPC4O75487 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms