Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF13O43567 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF13O43567 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF13O43567 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
RNF13O43567 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RNF13O43567 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF13O43567 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF13O43567 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF13O43567 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RNF13O43567 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF13O43567 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.75□□□□□ -0.05
RNF13O43567 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF13O43567 AC140658.5-201ENST00000438532 169 ntBASIC14.75□□□□□ -0.05
RNF13O43567 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 KRT18P2-201ENST00000447938 1258 ntBASIC14.75□□□□□ -0.05
RNF13O43567 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF13O43567 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.75□□□□□ -0.05
RNF13O43567 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF13O43567 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 RNA5SP416-201ENST00000516838 111 ntBASIC14.75□□□□□ -0.05
RNF13O43567 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF13O43567 AC013268.4-201ENST00000637413 2228 ntBASIC14.75□□□□□ -0.05
RNF13O43567 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
RNF13O43567 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF13O43567 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 CDC14C-201ENST00000428251 1719 ntBASIC14.75□□□□□ -0.05
RNF13O43567 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF13O43567 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 LINC02447-202ENST00000501888 2146 ntBASIC14.74□□□□□ -0.05
RNF13O43567 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 AC112504.1-201ENST00000623415 1841 ntBASIC14.74□□□□□ -0.05
RNF13O43567 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 AC026396.1-201ENST00000419388 421 ntBASIC14.74□□□□□ -0.05
RNF13O43567 MED15P5-201ENST00000423150 992 ntBASIC14.74□□□□□ -0.05
RNF13O43567 AC092474.2-201ENST00000424288 719 ntBASIC14.74□□□□□ -0.05
RNF13O43567 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF13O43567 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.74□□□□□ -0.05
RNF13O43567 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RNF13O43567 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.74□□□□□ -0.05
RNF13O43567 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RNF13O43567 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RNF13O43567 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RNF13O43567 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RNF13O43567 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms