Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
MSI1O43347 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.73■□□□□ 0.27
MSI1O43347 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 HAUS4P1-201ENST00000406739 1145 ntBASIC16.73■□□□□ 0.27
MSI1O43347 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.73■□□□□ 0.27
MSI1O43347 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.73■□□□□ 0.27
MSI1O43347 AL512638.1-201ENST00000457493 794 ntBASIC16.73■□□□□ 0.27
MSI1O43347 AC004890.2-204ENST00000481968 304 ntBASIC16.73■□□□□ 0.27
MSI1O43347 RNA5SP421-201ENST00000516864 134 ntBASIC16.73■□□□□ 0.27
MSI1O43347 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 AL512361.1-201ENST00000554200 418 ntBASIC16.73■□□□□ 0.27
MSI1O43347 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 AL844908.2-201ENST00000609461 460 ntBASIC16.73■□□□□ 0.27
MSI1O43347 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.73■□□□□ 0.27
MSI1O43347 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MSI1O43347 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.73■□□□□ 0.27
MSI1O43347 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MSI1O43347 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MSI1O43347 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.72■□□□□ 0.27
MSI1O43347 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MSI1O43347 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MSI1O43347 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.72■□□□□ 0.27
MSI1O43347 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.72■□□□□ 0.27
MSI1O43347 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.72■□□□□ 0.27
MSI1O43347 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.72■□□□□ 0.27
MSI1O43347 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.72■□□□□ 0.27
MSI1O43347 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.72■□□□□ 0.27
MSI1O43347 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.72■□□□□ 0.27
MSI1O43347 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.72■□□□□ 0.27
MSI1O43347 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 KRT8P12-202ENST00000472924 1397 ntBASIC16.72■□□□□ 0.27
MSI1O43347 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 BNIP3P1-202ENST00000550043 1585 ntBASIC16.72■□□□□ 0.27
MSI1O43347 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MSI1O43347 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.72■□□□□ 0.27
MSI1O43347 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MSI1O43347 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.71■□□□□ 0.27
MSI1O43347 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.71■□□□□ 0.27
MSI1O43347 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.71■□□□□ 0.27
MSI1O43347 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.71■□□□□ 0.27
MSI1O43347 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MSI1O43347 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.71■□□□□ 0.27
MSI1O43347 SPDYE17-201ENST00000412399 783 ntBASIC16.71■□□□□ 0.27
MSI1O43347 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.71■□□□□ 0.27
MSI1O43347 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 AC243562.2-201ENST00000561247 970 ntBASIC16.71■□□□□ 0.27
MSI1O43347 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MSI1O43347 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MSI1O43347 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 CYP2T1P-202ENST00000641596 2535 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms