Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC098850.1-201ENST00000419919 790 ntBASIC19.29■□□□□ 0.68
SEMA3EO15041 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.29■□□□□ 0.68
SEMA3EO15041 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.29■□□□□ 0.68
SEMA3EO15041 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.29■□□□□ 0.68
SEMA3EO15041 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.29■□□□□ 0.68
SEMA3EO15041 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.29■□□□□ 0.68
SEMA3EO15041 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SEMA3EO15041 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.29■□□□□ 0.68
SEMA3EO15041 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SEMA3EO15041 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 AC011477.6-201ENST00000604980 1927 ntBASIC19.29■□□□□ 0.68
SEMA3EO15041 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
SEMA3EO15041 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEMA3EO15041 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SEMA3EO15041 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
SEMA3EO15041 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.28■□□□□ 0.68
SEMA3EO15041 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.28■□□□□ 0.68
SEMA3EO15041 INE1-201ENST00000456273 945 ntBASIC19.28■□□□□ 0.68
SEMA3EO15041 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.28■□□□□ 0.68
SEMA3EO15041 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.28■□□□□ 0.68
SEMA3EO15041 SLED1-202ENST00000512051 380 ntBASIC19.28■□□□□ 0.68
SEMA3EO15041 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SEMA3EO15041 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SEMA3EO15041 CTBP2P3-201ENST00000585629 1255 ntBASIC19.28■□□□□ 0.68
SEMA3EO15041 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
SEMA3EO15041 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA3EO15041 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SEMA3EO15041 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.27■□□□□ 0.68
SEMA3EO15041 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.27■□□□□ 0.68
SEMA3EO15041 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.27■□□□□ 0.68
SEMA3EO15041 GK-202ENST00000378941 458 ntTSL 3 BASIC19.27■□□□□ 0.68
SEMA3EO15041 AL512384.1-201ENST00000406683 331 ntBASIC19.27■□□□□ 0.68
SEMA3EO15041 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.27■□□□□ 0.68
SEMA3EO15041 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.27■□□□□ 0.68
SEMA3EO15041 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.27■□□□□ 0.68
SEMA3EO15041 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.27■□□□□ 0.68
SEMA3EO15041 RN7SL399P-201ENST00000471648 279 ntBASIC19.27■□□□□ 0.68
SEMA3EO15041 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.27■□□□□ 0.68
SEMA3EO15041 AC104596.2-201ENST00000512793 793 ntBASIC19.27■□□□□ 0.68
SEMA3EO15041 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SEMA3EO15041 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.27■□□□□ 0.68
SEMA3EO15041 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.27■□□□□ 0.68
SEMA3EO15041 AC036164.1-201ENST00000570544 333 ntBASIC19.27■□□□□ 0.68
SEMA3EO15041 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.27■□□□□ 0.68
SEMA3EO15041 AC097359.3-201ENST00000603982 1210 ntBASIC19.27■□□□□ 0.68
SEMA3EO15041 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.27■□□□□ 0.68
SEMA3EO15041 IGHV3-72-202ENST00000621503 303 ntBASIC19.27■□□□□ 0.68
SEMA3EO15041 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA3EO15041 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.27■□□□□ 0.67
SEMA3EO15041 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SEMA3EO15041 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA3EO15041 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA3EO15041 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.27■□□□□ 0.67
SEMA3EO15041 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SEMA3EO15041 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA3EO15041 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.27■□□□□ 0.67
SEMA3EO15041 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA3EO15041 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA3EO15041 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SEMA3EO15041 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms